This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00006YX.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Human coronavirus HKU1
Collection date
2024-03-05
Country
Switzerland
Consensus length
29939

Lineage and Clade

Seasonal coronavirus type
HKU1

Nextclade QC

Nextclade coverage
0.8254026598944062
Nextclade QC status
bad
Nextclade QC score
236.23689999999996
Missing data QC score
153.7
Mixed sites QC score
0
Private mutations QC score
0
SNP clusters QC score
0
Frame shifts QC score
0
Stop codons QC score
0

Submission details

Submission ID
OZ373702
Submitting group
Date submitted
2026-06-11 11:37:25 UTC
Date released
2026-06-11 11:37:35 UTC

Nucleotide mutations

Mutations called relative to the NC_006577.2 reference

Substitutions

  • C146T
  • C361T
  • G414T
  • A1131C
  • T1246C
  • C1393T
  • A1429G
  • A1470C
  • C1501T
  • G1531A
  • A1558C
  • C1714T
  • T1732C
  • C1772T
  • C1786T
  • G1822A
  • T2083C
  • T2794C
Deletions
N/A
Insertions

ins_21757:TTCAGTTTGTTAA

Amino acid substitutions

Substitutions called relative to the NC_006577.2 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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