This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00006HT.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Human coronavirus OC43
Collection date
2023-03-29
Country
Switzerland
Consensus length
30746

Lineage and Clade

Seasonal coronavirus type
OC43

Nextclade QC

Nextclade coverage
0.7791658533411413
Nextclade QC status
bad
Nextclade QC score
415.0080444444444
Missing data QC score
202.73333333333332
Mixed sites QC score
0
Private mutations QC score
0
SNP clusters QC score
0
Frame shifts QC score
20
Stop codons QC score
0

Submission details

Submission ID
OZ373105
Submitting group
Date submitted
2026-06-11 11:37:25 UTC
Date released
2026-06-11 11:37:35 UTC

Nucleotide mutations

Mutations called relative to the AY391777.1 reference

Substitutions

  • T297C
  • G472T
  • T546C
  • C683A
  • A684G
  • G712T
  • C829T
  • T1082C
  • C1159T
  • T1215C
  • C1353T
  • C1548T
  • T1753C
  • T1843A
  • C2042T
  • C2043T
  • C2166T
  • C2372A
Deletions

23900
Insertions

ins_23903:TGACTT, ins_23988:GGC

Amino acid substitutions

Substitutions called relative to the AY391777.1 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue