This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00006FY.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Human coronavirus HKU1
Collection date
2024-01-15
Country
Switzerland
Consensus length
29935

Lineage and Clade

Seasonal coronavirus type
HKU1

Nextclade QC

Nextclade coverage
0.9899752723384349
Nextclade QC status
good
Nextclade QC score
0
Missing data QC score
0
Mixed sites QC score
0
Private mutations QC score
0
SNP clusters QC score
0
Frame shifts QC score
0
Stop codons QC score
0

Submission details

Submission ID
OZ373096
Submitting group
Date submitted
2026-06-11 11:37:25 UTC
Date released
2026-06-11 11:37:35 UTC

Nucleotide mutations

Mutations called relative to the NC_006577.2 reference

Substitutions

  • T581A
  • A1587G
  • T1693C
  • C1819T
  • A1870G
  • C1889T
  • T2449C
  • C2542T
  • C2997T
  • C3001T
  • C3022T
  • A3461G
  • C3510T
  • A3530G
  • C3547A
  • C3586T
  • T3652G
  • T3685C
Deletions
N/A
Insertions

ins_24318:AGGACAGAT

Amino acid substitutions

Substitutions called relative to the NC_006577.2 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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