This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00005V4.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Severe acute respiratory syndrome coronavirus 2
Collection date
2023-12-28
Country
Switzerland
Consensus length
29900

Lineage and Clade

Pango lineage
JN.1
Nextclade clade
24A

Nextclade QC

Nextclade coverage
0.9951844296558874
Nextclade QC status
good
Nextclade QC score
8.506944444444445
Missing data QC score
0
Mixed sites QC score
0
Private mutations QC score
29.166666666666668
SNP clusters QC score
0
Frame shifts QC score
0
Stop codons QC score
0

Submission details

Submission ID
OZ373494
Submitting group
Date submitted
2026-06-11 11:37:15 UTC
Date released
2026-06-11 11:37:25 UTC

Nucleotide mutations

Mutations called relative to the MN908947.3 reference

Substitutions

  • T10A
  • C21T
  • C44T
  • C241T
  • T670G
  • C897A
  • C1060T
  • C1627A
  • G2468A
  • C2790T
  • C3037T
  • G3431T
  • T3565C
  • G4184A
  • C4321T
  • A6183G
  • A7842G
  • C8293T
Deletions

21992-21994
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the MN908947.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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