This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00005U6.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Severe acute respiratory syndrome coronavirus 2
Collection date
2023-12-24
Country
Switzerland
Consensus length
29903

Lineage and Clade

Pango lineage
HK.11.1
Nextclade clade
23F

Nextclade QC

Nextclade coverage
0.9803698625555964
Nextclade QC status
good
Nextclade QC score
0.818244170096022
Missing data QC score
3.5185185185185186
Mixed sites QC score
0
Private mutations QC score
8.333333333333334
SNP clusters QC score
0
Frame shifts QC score
0
Stop codons QC score
0

Submission details

Submission ID
OZ373493
Submitting group
Date submitted
2026-06-11 11:37:15 UTC
Date released
2026-06-11 11:37:25 UTC

Nucleotide mutations

Mutations called relative to the MN908947.3 reference

Substitutions

  • C44T
  • C241T
  • A405G
  • T670G
  • C2334T
  • C2790T
  • C3037T
  • G4184A
  • C4321T
  • T4789A
  • C4901A
  • G5720A
  • C6541T
  • C9344T
  • A9424G
  • C9534T
  • C9693T
  • C9866T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the MN908947.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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