This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00005ML.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Severe acute respiratory syndrome coronavirus 2
Collection date
2023-11-23
Country
Switzerland
Consensus length
29891

Lineage and Clade

Pango lineage
HK.3.9
Nextclade clade
23H

Nextclade QC

Nextclade coverage
0.9966558539276995
Nextclade QC status
good
Nextclade QC score
21.00694444444445
Missing data QC score
0
Mixed sites QC score
0
Private mutations QC score
45.833333333333336
SNP clusters QC score
0
Frame shifts QC score
0
Stop codons QC score
0

Submission details

Submission ID
OZ373390
Submitting group
Date submitted
2026-06-11 11:37:15 UTC
Date released
2026-06-11 11:37:25 UTC

Nucleotide mutations

Mutations called relative to the MN908947.3 reference

Substitutions

  • T10A
  • C44T
  • C241T
  • A405G
  • T670G
  • A1269G
  • C2334T
  • C2790T
  • C3037T
  • G4184A
  • C4321T
  • G5720A
  • C6541T
  • C9344T
  • A9424G
  • C9534T
  • C9693T
  • C9866T
Deletions

11288-11296, 21992-21994
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the MN908947.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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