This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00005FZ.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Severe acute respiratory syndrome coronavirus 2
Collection date
2023-11-17
Country
Switzerland
Consensus length
29903

Lineage and Clade

Pango lineage
JN.1
Nextclade clade
24A

Nextclade QC

Nextclade coverage
0.9505735210513995
Nextclade QC status
good
Nextclade QC score
11.711604938271606
Missing data QC score
34.22222222222222
Mixed sites QC score
0
Private mutations QC score
0
SNP clusters QC score
0
Frame shifts QC score
0
Stop codons QC score
0

Submission details

Submission ID
OZ373353
Submitting group
Date submitted
2026-06-11 11:37:15 UTC
Date released
2026-06-11 11:37:25 UTC

Nucleotide mutations

Mutations called relative to the MN908947.3 reference

Substitutions

  • C241T
  • T670G
  • C897A
  • C2790T
  • C3037T
  • G3431T
  • T3565C
  • G4184A
  • C4321T
  • A6183G
  • G6362T
  • A7842G
  • C8293T
  • G8393A
  • C8802T
  • C9344T
  • A9424G
  • C9534T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the MN908947.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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