This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00005E1.1

Source

ReVSeq source accession
ENA sequence accession
ENA run accession
ENA sample accession

Sample

Scientific name
Severe acute respiratory syndrome coronavirus 2
Collection date
2024-06-30
Country
Switzerland
Consensus length
29889

Lineage and Clade

Pango lineage
MC.1
Nextclade clade
24E

Nextclade QC

Nextclade coverage
0.9944487175199813
Nextclade QC status
bad
Nextclade QC score
132.8125
Missing data QC score
0
Mixed sites QC score
0
Private mutations QC score
87.5
SNP clusters QC score
0
Frame shifts QC score
75
Stop codons QC score
0

Submission details

Submission ID
OZ373296
Submitting group
Date submitted
2026-06-11 11:37:15 UTC
Date released
2026-06-11 11:37:25 UTC

Nucleotide mutations

Mutations called relative to the MN908947.3 reference

Substitutions

  • T10A
  • C21T
  • C44T
  • C241T
  • T670G
  • C897A
  • C2790T
  • C3037T
  • G3431T
  • T3565C
  • G4184A
  • C4321T
  • A6183G
  • C7113T
  • A7842G
  • C8293T
  • G8393A
  • C9344T
Deletions

11288-11296, 21992-21994, 22031, 22194-22196
Insertions

ins_22034:GG

Amino acid substitutions

Substitutions called relative to the MN908947.3 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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